species:   Scscl
pid:       PID1583
parent:    Ssc-milR-59
paralog:   
locus:     NW_001820817.1:3217-3296
matures:   ['UAUAGGUGUAGGAGAGCUUGA', 'GAGCUUUUACUAGAGUUGAUUGUA']
srr:       SRR12527898
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.GCF_000146945.2_ASM14694v2.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527898.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Xia2020-rh.SRR12527898.cram NW_001820817.1:3217-3296

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

        ***********************               **************************        
CAGUCUCAAAUAUAGGUGUAGGAGAGCUUGAUUGAUGACGAGUUAUUCGAGCUUUUACUAGAGUUGAUUGUAAGAGAGCC
...((((..((((((.(.(((((((((((((.((((.....)))).)))))))))).))).).)))..)))..))))...
----------UAUAGGUGUAGGAGAGCUUGA------------------------------------------------- l=21 a=0 c
------------------------------------------------GAGCUUUUACUAGAGUUGAUUGUA-------- l=24 a=0 c*
----------UAUAGGUGUAGGAGAGCUUGA------------------------------------------------- l=21 a=0 ma
------------------------------------------------GAGCUUUUACUAGAGUUGAUUGUA-------- l=24 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
